Every letter we have printed
Page 68 of 93 of this archive, newest first.
On “What the nitrogen said” — Analytics, 17 Sep 2024
As a matter of fairness: the supplier that started reporting content after you contacted them deserves to be named. You name people when they behave badly.
— A. Basaraba, Winnipeg, MB
A fair point. It is Shanghai Sigma-Audley, and the change appeared on certificates from the following quarter.
On “What the trials monitored, and what that implies about routine practice” — Laboratory Notebook, 15 Sep 2024
Timing consistency is undervalued. Same laboratory, same time of day, same fasting state removes a large part of the noise between draws for no cost whatever, and it makes a modest true change visible that would otherwise be buried.
— D. Iversen, Aalborg
Same laboratory in particular, because it holds the method constant along with everything else. It is the cheapest precision available.
On “What the trials monitored, and what that implies about routine practice” — Laboratory Notebook, 15 Sep 2024
The discipline your article recommends is the right one: decide what you would do differently for each result before ordering it. Anything that fails that test is generating a number that will be worried about and not acted on.
— L. Wickramasinghe, Kandy
It is the only screening principle that survives contact with a broad panel, and it eliminates about half of what is commonly ordered.
On “What the trials monitored, and what that implies about routine practice” — Laboratory Notebook, 15 Sep 2024
As a biomedical scientist I would add one point to your reference-interval section: many laboratories do not derive their own intervals at all. They adopt the manufacturer interval for the platform, which was established in a population that may have nothing to do with the one being tested. The interval on the report can be a document about a different country.
— E. Marchbank, Perth, WA
This is correct, common, and something we should have stated. We have added it, and it strengthens rather than weakens the argument for within-person comparison.
On “The tolerability data everybody quotes and nobody reads” — Pharmacology, 15 Sep 2024
Where the same event can be coded under two dictionary terms, incidence is split between them and each looks smaller. Coding conventions are a technical matter with a large effect on the numbers people quote.
— L. Wickramasinghe, Kandy
On “The tolerability data everybody quotes and nobody reads” — Pharmacology, 15 Sep 2024
Self-reported incidence collected in online communities is not comparable with trial incidence in any direction, and it is put side by side with it regularly. Different populations, different definitions, different collection, one chart.
— D. Iversen, Aalborg
The two datasets answer different questions and neither validates the other. Where we cite community data we say what it is and what it is not.
On “The tolerability data everybody quotes and nobody reads” — Pharmacology, 15 Sep 2024
The material this publication covers is not approved for human use in any jurisdiction, which changes what a safety discussion can even mean. A pharmacovigilance system attaches to an approved product and there is no analogous system here at all.
— H. Adeyinka, Lokoja
On “Twelve minutes or forty: what gradient slope buys” — Explainers, 14 Sep 2024
Your list of twelve method values omits the equilibration time between injections. On a shallow gradient with an aqueous-rich starting composition, an inadequate re-equilibration will shift early-eluting impurities into the solvent front and quietly remove them from the denominator. It is the cheapest way to improve a figure by accident.
— R. Duffy-Behan, Athlone
A fair addition, and it belongs with the gradient programme rather than beside it. We have added a note to the reference sidebar. The general point stands: the values that move the answer are the ones that are never printed.
On “Twelve minutes or forty: what gradient slope buys” — Explainers, 14 Sep 2024
We changed to core-shell particles two years ago for exactly the reasons you set out, and I would add one that you do not mention. The pressure headroom means a column survives a badly filtered sample instead of blocking, which in a service laboratory is worth more than the extra plate count.
— C. Rautenbach, Pretoria
On “Twelve minutes or forty: what gradient slope buys” — Explainers, 14 Sep 2024
Two-dimensional liquid chromatography now exists in a form a service laboratory can afford, and it collapses the whole argument: the second separation happens on the fraction rather than on the sample. It is still a specialist purchase, but the price is falling and the case for it in this market is stronger than in most.
— A. Basaraba, Winnipeg, MB
On “Twelve minutes or forty: what gradient slope buys” — Explainers, 14 Sep 2024
Capillary electrophoresis is the forgotten answer here. It separates on charge-to-size in free solution, it needs a few nanolitres, and for anybody who already has the instrument it is an afternoon. The barrier is not cost or difficulty; it is that hardly anyone in this trade has been trained on it.
— B. Novotný, Ostrava
On “The lead-in, the randomisation, and the year that followed” — The Ledger, 13 Sep 2024
The trials are conducted with pharmaceutical-grade material under supervision. Whatever they establish, they establish about that material in that setting, and the extension of their findings to a research-supply context is an assumption rather than a result.
— L. Oyarzún, Concepción
On “The lead-in, the randomisation, and the year that followed” — The Ledger, 13 Sep 2024
The curves everybody reproduces are drawn from the last available observation for participants who left early, which is a specific analytical choice with a known direction of bias. Alternative analyses are usually in the appendix and rarely differ dramatically, but readers should know one was made.
— P. Hollingsworth, Norwich
Handling of missing data is a choice, it is stated in the methods, and it is never mentioned in a secondary account. It is worth asking for whenever a curve is quoted.
On “The lead-in, the randomisation, and the year that followed” — The Ledger, 13 Sep 2024
Reasons given in public forums are shaped by the audience. A community that values persistence will hear fewer accounts of stopping, and a community that is sceptical will hear more. Neither is a sample of anything.
— G. Thorbjørnsen, Tromsø
On “The lead-in, the randomisation, and the year that followed” — The Ledger, 13 Sep 2024
Reasons collected by a supplier, a clinician and a researcher would produce three different distributions from the same population, because people say different things to different audiences. Every dataset in this area is an artefact of who was asking.
— R. Whitlam, Adelaide, SA
On “Which results are findings and which are consequences of the weight loss” — Patient Notes, 13 Sep 2024
Supplements taken before a draw interfere with several assays directly, which is a chemical interference rather than a physiological effect. It is well documented and almost never asked about.
— D. Achebe, Nsukka
On “Which results are findings and which are consequences of the weight loss” — Patient Notes, 13 Sep 2024
Tube type and fill volume matter. An underfilled tube changes the ratio of sample to additive, and the result is affected in a direction that depends on the analyte. The laboratory notices; the person receiving the report usually does not.
— T. Kirchner, Hamburg
On “The fourteen-day problem, and what it does to a commercial testing model” — The Supply Chain, 11 Sep 2024
Turnaround is the practical obstacle. A compendial sterility test takes a fortnight, which for material with a short commercial life is a genuine cost rather than an excuse. Rapid methods exist and validating one is not trivial.
— D. Iversen, Aalborg
On “The fourteen-day problem, and what it does to a commercial testing model” — The Supply Chain, 11 Sep 2024
A note on scale. A supplier filling thousands of units has a fixed-cost argument for better process control that a small operation does not, and the market’s structure therefore affects what is even feasible. That is worth a piece in its own right.
— J. Okafor-Reid, Enugu
On “The fourteen-day problem, and what it does to a commercial testing model” — The Supply Chain, 11 Sep 2024
Naming an absence without implying a hazard is a difficult editorial line and your department walks it more carefully than most. Saying that something is unmeasured is a statement about measurement, not about risk.
— E. Beauchamp, Ottawa, ON
That is exactly the line and it is worth stating: an unmeasured quantity is unknown in both directions. We report what has not been established, and nothing follows from that about what would be found.
On “Weight regain is not a failure of willpower and it is not a mystery” — Clinical Trials, 11 Sep 2024
Composition of regained tissue is barely studied and is the question I would most like answered. Whether what returns resembles what was lost has practical consequences and there is very little data on it.
— E. Vandenberghe, Ghent
On “Weight regain is not a failure of willpower and it is not a mystery” — Clinical Trials, 11 Sep 2024
The regain trajectory is presented as a mean curve and the variation around it is very wide. Some participants hold most of the change and some return close to baseline, and the average describes neither of them well.
— L. Braithwaite, Wellington
Which is why we publish the distribution where a paper provides one. A mean regain curve is a summary of a population nobody is.
On “Weight regain is not a failure of willpower and it is not a mystery” — Clinical Trials, 11 Sep 2024
Cost is a maintenance variable and it is treated as though it were outside the clinical question. For most people the sustainable dose is the affordable one, and a plan that ignores that will be abandoned rather than followed.
— H. Baptiste, Fort-de-France
Which is why the ledger department and this one keep landing on the same story from opposite ends.
On “Weight regain is not a failure of willpower and it is not a mystery” — Clinical Trials, 11 Sep 2024
Where people give more than one reason, most analyses take the first mentioned, which is an ordering effect rather than a weighting. Asking respondents to rank would cost nothing and would change several published distributions.
— R. Hollenbeck, Spokane, WA
On “Target dose, effective dose, and the distance between them” — Patient Notes, 10 Sep 2024
Nobody has published what happens to intake over the course of these trials, though several must have collected it. A plateau explained by intake returning toward baseline is a different phenomenon from one explained by anything pharmacological.
— B. Ademola, Ilorin
Intake data exists in several of these programmes and has not been published. It is the missing variable that would settle a good deal of this argument.
On “Target dose, effective dose, and the distance between them” — Patient Notes, 10 Sep 2024
The word plateau implies a stable state and what the data usually shows is a decelerating one. Those are different shapes with different implications for what happens next, and the distinction is lost in every summary I read.
— Y. Sasaki, Sapporo
On “Target dose, effective dose, and the distance between them” — Patient Notes, 10 Sep 2024
The claim that nobody has randomised escalation intervals is too strong. There are protocol amendments in several programmes that effectively created slower-titration cohorts, and some of those have been analysed post hoc.
— R. Perreault, Trois-Rivières, QC
Post-hoc comparison of cohorts created by amendment is not randomisation, and treating it as such is exactly the elision we were objecting to. We accept that such analyses exist and are informative; we maintain that they cannot settle the question, and the file now says so in those terms.
On “Target dose, effective dose, and the distance between them” — Patient Notes, 10 Sep 2024
The tolerability curve and the efficacy curve have different shapes, and the interesting region is where they diverge. Almost all discussion of ceilings addresses one curve at a time.
— N. Bujanović, Sarajevo
Plotting both against exposure on one axis is the presentation this subject needs, and the data to do it exists in the published dose-ranging work.
On “Target dose, effective dose, and the distance between them” — Patient Notes, 10 Sep 2024
The composition question sits underneath the plateau question and is almost never asked with it. A flat mass curve can conceal a continuing change in composition in either direction, and the scale on the floor cannot distinguish them.
— T. Kaminski, Bydgoszcz
A stable weight is not a stable body, and the composition department has made the same point from the other direction. The two questions belong together.
On “Longer is not safer” — Explainers, 10 Sep 2024
Disposal is the part of this subject with actual legal content in most jurisdictions, and it is the part least discussed. The rules are public, they differ by locality, and they are not difficult to find.
— L. Marulanda, Medellín
Disposal is the one aspect of handling practice governed by an actual rule almost everywhere, and it is the one nobody writes about.
On “Longer is not safer” — Explainers, 10 Sep 2024
Gauge numbering runs backwards and it catches people out constantly. A higher number is a thinner needle. A reader who assumes the number tracks the diameter will order the opposite of what they wanted, and the packaging does nothing to help.
— M. Delgado-Rios, Córdoba
Backwards and unlabelled, which is a poor combination. The reference box now states the direction explicitly rather than assuming it.
On “Longer is not safer” — Explainers, 10 Sep 2024
A quibble on your dead-space figure. You give two to seven microlitres for insulin-type needles, which is right for fixed-needle syringes, but the detachable pen needle plus syringe hub combinations sold in this market are considerably worse and you should say so.
— S. Ó Ceallaigh, Limerick
Accepted and amended. The figure we gave applies to integrated fixed-needle insulin syringes; detachable arrangements on a luer fitting can retain an order of magnitude more, which at small injection volumes is a substantial loss. The table now distinguishes them.
On “Amylin is not an incretin, and cagrilintide is not a GLP-1 agonist” — Pharmacology, 10 Sep 2024
Amylin analogues sit adjacent to this discussion and are usually left out of it. The mechanism is different, the combination data are early, and the reason they belong in a piece about multi-receptor design is that they show the field is not converging on one receptor family.
— H. Terauchi, Sendai
On “Amylin is not an incretin, and cagrilintide is not a GLP-1 agonist” — Pharmacology, 10 Sep 2024
The published potency ratios for multi-target compounds vary by more than an order of magnitude between molecules described by the same term. The term names an architecture, not a profile.
— R. Perreault, Trois-Rivières, QC
Architecture and profile are different facts and the naming convention conflates them, which is why two compounds in the same category can behave very differently.
On “Amylin is not an incretin, and cagrilintide is not a GLP-1 agonist” — Pharmacology, 10 Sep 2024
A small thing: you write "class B GPCR" and then "secretin-like receptor" as though these were different classifications. They are the same family under two naming conventions, and the piece would be clearer if it said so.
— B. Ceylan, Izmir
Fair, and now stated in the text.
On “Amylin is not an incretin, and cagrilintide is not a GLP-1 agonist” — Pharmacology, 10 Sep 2024
Subcutaneous absorption is not instantaneous and the rate depends on the depot. That is a pharmacokinetic reason for site rotation which has nothing to do with tissue irritation, and it is a more interesting reason than the one usually given.
— M. Ferrari, Trieste
On “Before anything is weighed, the peptide has to be charged” — Analytics, 8 Sep 2024
Your account of electrospray is clear but it understates how much the additive matters. A mobile phase carrying trifluoroacetic acid suppresses ionisation substantially, which is why a laboratory running an excellent chromatographic method sometimes has to change it entirely before the same sample will give a usable spectrum. The two techniques want different solvents.
— T. Kaminski, Bydgoszcz
That tension is worth stating plainly and we did not state it. The additive that gives the best peak shape is not the additive that gives the best signal, and a service running both from one injection has compromised somewhere.
On “Before anything is weighed, the peptide has to be charged” — Analytics, 8 Sep 2024
Ion suppression is the point I would put in bold. A species that ionises poorly in the presence of an excess of something that ionises well can be present at several per cent and invisible in the spectrum. Absence of a peak is not absence of a compound, and the report cannot tell you which you have.
— L. Wickramasinghe, Kandy
The distinction between an absent signal and an absent species is the one this whole section turns on, and you have stated it more compactly than the piece did.
On “The substudies, read properly: who was scanned, when, and with what” — Patient Notes, 8 Sep 2024
A substudy is powered for the parent trial’s primary endpoint and not for its own, which is why the intervals around composition figures are so wide. Quoting the point estimate without the interval misrepresents the design as much as the result.
— D. Yamashita, Okayama
Power is the structural limitation of every composition substudy in this literature, and it is a design consequence rather than a flaw. The intervals are the honest part of the output.
On “The substudies, read properly: who was scanned, when, and with what” — Patient Notes, 8 Sep 2024
The substudies are the most expensive part of these programmes per participant, which is why they are small, and their size is then treated as a weakness of the finding rather than a consequence of the method.
— T. Wexford, Louisville, KY